Detailed information of matrix profile MA1265.2

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Profile summary
Name: ERF015
Matrix ID: MA1265.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q6NLD5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 375 130 26 1121 3 6 9 897 11 1001 438 384 ]
C [ 146 594 1145 0 1209 1209 1 141 1201 30 361 330 ]
G [ 356 153 18 73 2 0 1205 24 3 132 181 147 ]
T [ 341 341 29 24 4 3 3 156 3 55 238 357 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1265.1 MA1265 1 ERF015 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1265.2 MA1265 2 ERF015 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1265.3 MA1265 3 ERF015 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0267.2

ChIP-seq Centrality
-log(P-value): 610.479

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0267.2

ChIP-seq Centrality
-log(P-value): 646.735

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: