Detailed information of matrix profile MA1263.1

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Profile summary
Name: ERF055
Matrix ID: MA1263.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q9SKW5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 93 115 166 39 37 459 1 0 0 291 0 226 296 200 ]
C [ 246 319 63 378 535 0 597 598 0 171 598 277 133 145 ]
G [ 78 54 171 70 18 139 0 0 598 19 0 45 37 21 ]
T [ 181 110 198 111 8 0 0 0 0 117 0 50 132 232 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1263.1 MA1263 1 ERF055 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1263.2 MA1263 2 ERF055 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0234.1

ChIP-seq Centrality
-log(P-value): 581.742

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0234.1

ChIP-seq Centrality
-log(P-value): 581.405

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: