Detailed information of matrix profile MA1263.1

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Profile summary
Name: ERF055
Matrix ID: MA1263.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q9SKW5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 232 132 50 0 117 0 0 0 0 8 111 198 110 181 ]
C [ 21 37 45 0 19 598 0 0 139 18 70 171 54 78 ]
G [ 145 133 277 598 171 0 598 597 0 535 378 63 319 246 ]
T [ 200 296 226 0 291 0 0 1 459 37 39 166 115 93 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1263.1 MA1263 1 ERF055 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1263.2 MA1263 2 ERF055 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0234.1

ChIP-seq Centrality
-log(P-value): 581.742

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0234.1

ChIP-seq Centrality
-log(P-value): 581.405

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: