Detailed information of matrix profile MA1245.2

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Profile summary
Name: ERF112
Matrix ID: MA1245.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: P93007  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 641 217 168 253 1 38 219 7 38 831 304 ]
C [ 302 1507 2246 20 2454 2449 3 2446 2406 73 1165 ]
G [ 895 361 33 2173 37 1 2236 14 3 1264 243 ]
T [ 657 410 48 49 3 7 37 28 48 327 783 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1245.1 MA1245 1 ERF112 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1245.2 MA1245 2 ERF112 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1245.3 MA1245 3 ERF112 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0253.2

ChIP-seq Centrality
-log(P-value): 627.098

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0253.2

ChIP-seq Centrality
-log(P-value): 597.646

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: