Detailed information of matrix profile MA1244.2

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Profile summary
Name: ABR1
Matrix ID: MA1244.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q9FGF8  
Source: 27203113
Comment: Also

Sequence logo

Frequency matrix

         
A [ 253 103 59 150 2 0 0 4 5 33 196 66 ]
C [ 18 97 15 27 590 0 12 584 10 105 298 36 ]
G [ 193 14 308 401 0 598 588 0 550 445 30 421 ]
T [ 136 386 218 22 8 2 0 12 35 17 76 77 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1244.1 MA1244 1 ABR1 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1244.2 MA1244 2 ABR1 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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