Detailed information of matrix profile MA1244.1

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Profile summary
Name: ABR1
Matrix ID: MA1244.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q9FGF8  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 122 145 140 100 181 237 225 253 103 59 150 2 0 0 4 5 33 196 66 ]
C [ 57 75 230 64 79 149 26 18 97 15 27 590 0 12 584 10 105 298 36 ]
G [ 317 281 96 308 285 79 186 193 14 308 401 0 598 588 0 550 445 30 421 ]
T [ 104 99 134 128 55 135 163 136 386 218 22 8 2 0 12 35 17 76 77 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1244.1 MA1244 1 ABR1 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1244.2 MA1244 2 ABR1 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0217.1

ChIP-seq Centrality
-log(P-value): 1516.66

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0217.1

ChIP-seq Centrality
-log(P-value): 1485.33

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: