Detailed information of matrix profile MA1244.2

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Profile summary
Name: ABR1
Matrix ID: MA1244.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q9FGF8  
Source: 27203113
Comment: Also

Sequence logo

Frequency matrix

         
A [ 77 76 17 35 12 0 2 8 22 218 386 136 ]
C [ 421 30 445 550 0 588 598 0 401 308 14 193 ]
G [ 36 298 105 10 584 12 0 590 27 15 97 18 ]
T [ 66 196 33 5 4 0 0 2 150 59 103 253 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1244.1 MA1244 1 ABR1 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1244.2 MA1244 2 ABR1 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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