Detailed information of matrix profile MA1243.1

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Profile summary
Name: DREB2E
Matrix ID: MA1243.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9952441
Uniprot ID: O80917  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 125 250 448 194 0 2 0 0 0 0 4 150 275 158 156 175 165 ]
C [ 155 33 3 8 0 0 597 0 0 66 7 70 117 67 92 118 106 ]
G [ 65 74 106 31 597 164 0 597 597 0 329 202 86 218 214 102 194 ]
T [ 252 240 40 364 0 431 0 0 0 531 257 175 119 154 135 202 132 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1243.1 MA1243 1 DREB2E Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1243.2 MA1243 2 DREB2E Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0326.1

ChIP-seq Centrality
-log(P-value): 8441.31

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0326.1

ChIP-seq Centrality
-log(P-value): 8382.83

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: