Detailed information of matrix profile MA1243.1

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Profile summary
Name: DREB2E
Matrix ID: MA1243.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9952441
Uniprot ID: O80917  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 132 202 135 154 119 175 257 531 0 0 0 431 0 364 40 240 252 ]
C [ 194 102 214 218 86 202 329 0 597 597 0 164 597 31 106 74 65 ]
G [ 106 118 92 67 117 70 7 66 0 0 597 0 0 8 3 33 155 ]
T [ 165 175 156 158 275 150 4 0 0 0 0 2 0 194 448 250 125 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1243.1 MA1243 1 DREB2E Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1243.2 MA1243 2 DREB2E Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0326.1

ChIP-seq Centrality
-log(P-value): 8441.31

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0326.1

ChIP-seq Centrality
-log(P-value): 8382.83

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: