Detailed information of matrix profile MA1241.1

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Profile summary
Name: ERF043
Matrix ID: MA1241.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q9M080  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 190 196 211 234 93 1 0 3 0 0 0 0 22 127 188 151 ]
C [ 73 96 97 38 81 23 0 0 591 0 0 51 14 83 153 82 ]
G [ 191 138 86 97 202 0 591 0 0 591 591 0 537 352 81 184 ]
T [ 137 161 197 222 215 567 0 588 0 0 0 540 18 29 169 174 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1241.1 MA1241 1 ERF043 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1241.2 MA1241 2 ERF043 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0268.1

ChIP-seq Centrality
-log(P-value): 11146.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0268.1

ChIP-seq Centrality
-log(P-value): 11106.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: