Detailed information of matrix profile MA1241.1

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Profile summary
Name: ERF043
Matrix ID: MA1241.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q9M080  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 174 169 29 18 540 0 0 0 588 0 567 215 222 197 161 137 ]
C [ 184 81 352 537 0 591 591 0 0 591 0 202 97 86 138 191 ]
G [ 82 153 83 14 51 0 0 591 0 0 23 81 38 97 96 73 ]
T [ 151 188 127 22 0 0 0 0 3 0 1 93 234 211 196 190 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1241.1 MA1241 1 ERF043 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1241.2 MA1241 2 ERF043 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0268.1

ChIP-seq Centrality
-log(P-value): 11146.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0268.1

ChIP-seq Centrality
-log(P-value): 11106.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: