Detailed information of matrix profile MA1239.1

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Profile summary
Name: ERF104
Matrix ID: MA1239.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q9FKG1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 149 192 62 0 89 3 0 0 25 5 90 169 75 141 124 95 101 116 105 ]
C [ 60 51 281 0 0 527 0 2 496 6 76 213 33 56 207 56 58 194 75 ]
G [ 218 274 0 553 466 0 557 555 0 464 369 50 363 293 61 309 317 96 299 ]
T [ 130 40 214 4 2 27 0 0 36 82 22 125 86 67 165 97 81 151 78 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1239.1 MA1239 1 ERF104 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1239.2 MA1239 2 ERF104 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: