Detailed information of matrix profile MA1239.1

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Profile summary
Name: ERF104
Matrix ID: MA1239.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q9FKG1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 78 151 81 97 165 67 86 125 22 82 36 0 0 27 2 4 214 40 130 ]
C [ 299 96 317 309 61 293 363 50 369 464 0 555 557 0 466 553 0 274 218 ]
G [ 75 194 58 56 207 56 33 213 76 6 496 2 0 527 0 0 281 51 60 ]
T [ 105 116 101 95 124 141 75 169 90 5 25 0 0 3 89 0 62 192 149 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1239.1 MA1239 1 ERF104 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1239.2 MA1239 2 ERF104 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: