Detailed information of matrix profile MA1234.1

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Profile summary
Name: ERF017
Matrix ID: MA1234.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q84QC2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 98 125 163 61 39 371 0 0 0 187 0 130 385 154 ]
C [ 226 292 84 306 524 0 599 599 0 42 599 403 53 183 ]
G [ 83 46 157 72 9 185 0 0 599 79 0 19 34 45 ]
T [ 192 136 195 160 27 43 0 0 0 291 0 47 127 217 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1234.1 MA1234 1 ERF017 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1234.2 MA1234 2 ERF017 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0231.1

ChIP-seq Centrality
-log(P-value): 7609.87

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0231.1

ChIP-seq Centrality
-log(P-value): 7577.47

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: