Detailed information of matrix profile MA1234.1

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Profile summary
Name: ERF017
Matrix ID: MA1234.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q84QC2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 217 127 47 0 291 0 0 0 43 27 160 195 136 192 ]
C [ 45 34 19 0 79 599 0 0 185 9 72 157 46 83 ]
G [ 183 53 403 599 42 0 599 599 0 524 306 84 292 226 ]
T [ 154 385 130 0 187 0 0 0 371 39 61 163 125 98 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1234.1 MA1234 1 ERF017 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1234.2 MA1234 2 ERF017 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0231.1

ChIP-seq Centrality
-log(P-value): 7609.87

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0231.1

ChIP-seq Centrality
-log(P-value): 7577.47

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: