Detailed information of matrix profile MA1233.2

  1. Home
  2. Matrix > MA1233.2

Profile summary
Name: ERF021
Matrix ID: MA1233.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q9C9I2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 789 763 752 80 40 342 19 13 21 177 531 656 775 789 865 ]
C [ 885 545 299 158 44 104 3076 14 76 2078 102 388 1265 362 509 ]
G [ 461 831 837 54 3048 500 8 3113 3024 15 2340 1691 363 1231 1062 ]
T [ 1024 1020 1271 2867 27 2213 56 19 38 889 186 424 756 777 723 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1233.1 MA1233 1 ERF021 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1233.2 MA1233 2 ERF021 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1233.3 MA1233 3 ERF021 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0664.1

ChIP-seq Centrality
-log(P-value): 1934.33

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0664.1

ChIP-seq Centrality
-log(P-value): 1813.92

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: