Detailed information of matrix profile MA1233.2

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Profile summary
Name: ERF021
Matrix ID: MA1233.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q9C9I2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 723 777 756 424 186 889 38 19 56 2213 27 2867 1271 1020 1024 ]
C [ 1062 1231 363 1691 2340 15 3024 3113 8 500 3048 54 837 831 461 ]
G [ 509 362 1265 388 102 2078 76 14 3076 104 44 158 299 545 885 ]
T [ 865 789 775 656 531 177 21 13 19 342 40 80 752 763 789 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1233.1 MA1233 1 ERF021 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1233.2 MA1233 2 ERF021 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1233.3 MA1233 3 ERF021 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0664.1

ChIP-seq Centrality
-log(P-value): 1934.33

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0664.1

ChIP-seq Centrality
-log(P-value): 1813.92

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: