Detailed information of matrix profile MA1225.1

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Profile summary
Name: ERF5
Matrix ID: MA1225.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: O80341  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 59 88 214 32 58 81 3 16 68 4 4 73 3 55 238 ]
C [ 369 385 42 360 494 0 529 564 0 537 576 0 418 424 17 ]
G [ 38 14 180 72 5 370 32 0 503 20 0 465 17 29 219 ]
T [ 114 93 144 116 23 129 16 0 9 19 0 42 142 72 106 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1225.1 MA1225 1 ERF5 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0336.1

ChIP-seq Centrality
-log(P-value): 214.086

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0336.1

ChIP-seq Centrality
-log(P-value): 228.406

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: