Detailed information of matrix profile MA1209.1

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Profile summary
Name: ATHB-20
Matrix ID: MA1209.1
Class: Homeo
Family: HD-ZIP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID: Q8LAT0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 58 30 230 230 0 218 230 0 0 71 131 ]
C [ 59 115 0 0 0 0 0 0 1 19 27 ]
G [ 23 2 0 0 0 9 0 0 0 110 31 ]
T [ 90 83 0 0 230 3 0 230 229 30 41 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1209.1 MA1209 1 ATHB-20 Arabidopsis thaliana
HD-ZIP Homeo
MA1209.2 MA1209 2 ATHB-20 Arabidopsis thaliana
HD-ZIP Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: