Detailed information of matrix profile MA1208.2

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Profile summary
Name: GT-2
Matrix ID: MA1208.2
Class: Tryptophan
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10437822
Uniprot ID: Q39117  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 171 111 181 35 0 128 598 0 40 136 33 ]
C [ 56 56 0 13 0 35 0 593 378 36 186 ]
G [ 62 29 0 21 0 0 0 0 4 295 25 ]
T [ 309 402 417 529 598 435 0 5 176 131 354 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1208.1 MA1208 1 GT-2 Arabidopsis thaliana
Trihelix Tryptophan
MA1208.2 MA1208 2 GT-2 Arabidopsis thaliana
Trihelix Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: