Detailed information of matrix profile MA1204.1

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Profile summary
Name: AGL13
Matrix ID: MA1204.1
Class: MADS
Family: MIKC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12743119
Uniprot ID: Q38837  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 59 9 123 2 0 141 169 219 174 174 81 74 0 120 209 191 126 90 ]
C [ 3 0 2 217 161 36 2 0 0 8 12 0 0 15 3 0 14 19 ]
G [ 0 2 25 0 0 7 7 0 0 6 15 145 217 5 0 4 41 20 ]
T [ 157 208 69 0 58 35 41 0 45 31 111 0 2 79 7 24 38 90 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1204.1 MA1204 1 AGL13 Arabidopsis thaliana
MIKC MADS
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: