Detailed information of matrix profile MA1203.1

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Profile summary
Name: AGL63
Matrix ID: MA1203.1
Class: MADS
Family: MIKC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12743119
Uniprot ID: Q9SA07  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 91 94 8 10 444 457 542 456 412 102 64 4 282 546 473 ]
C [ 6 33 579 544 35 9 0 1 28 100 0 0 235 13 10 ]
G [ 39 194 0 0 81 33 0 1 27 24 522 591 20 2 28 ]
T [ 461 276 10 43 37 98 55 139 130 371 11 2 60 36 86 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1203.1 MA1203 1 AGL63 Arabidopsis thaliana
MIKC MADS
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0220.1

ChIP-seq Centrality
-log(P-value): 31309.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0220.1

ChIP-seq Centrality
-log(P-value): 31859.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: