Detailed information of matrix profile MA1199.1

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Profile summary
Name: AGL16
Matrix ID: MA1199.1
Class: MADS
Family: MIKC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12743119
Uniprot ID: A2RVQ5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 35 11 100 0 0 123 66 131 0 44 109 62 0 210 358 ]
C [ 19 0 11 418 357 83 77 0 4 59 35 0 0 44 15 ]
G [ 4 3 28 0 0 23 40 0 4 23 135 356 393 12 8 ]
T [ 360 404 279 0 61 189 235 287 410 292 139 0 25 152 37 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1199.1 MA1199 1 AGL16 Arabidopsis thaliana
MIKC MADS
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: