Detailed information of matrix profile MA1196.2

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Profile summary
Name: AT5G05790
Matrix ID: MA1196.2
Class: Tryptophan
Family: MYB-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID:  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 319 295 16 139 0 7 587 0 0 133 119 131 351 92 ]
C [ 79 2 340 348 22 112 0 0 587 164 70 200 0 119 ]
G [ 59 33 40 67 0 15 0 0 0 15 57 116 26 37 ]
T [ 130 257 191 33 565 453 0 587 0 275 341 140 210 339 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1196.1 MA1196 1 AT5G05790 Arabidopsis thaliana
MYB-related Tryptophan
MA1196.2 MA1196 2 AT5G05790 Arabidopsis thaliana
MYB-related Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: