Detailed information of matrix profile MA1186.1

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Profile summary
Name: YAB4
Matrix ID: MA1186.1
Class: Tryptophan
Family: MYB-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9M9A3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 189 199 162 325 330 14 89 18 24 598 0 0 81 243 194 ]
C [ 152 103 112 65 20 321 428 12 54 0 0 599 279 49 202 ]
G [ 84 62 63 54 31 31 67 0 0 0 0 0 4 47 24 ]
T [ 174 235 262 155 218 233 15 569 521 1 599 0 235 260 179 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1186.1 MA1186 1 YAB4 Arabidopsis thaliana
MYB-related Tryptophan
MA1186.2 MA1186 2 YAB4 Arabidopsis thaliana
MYB-related Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0237.1

ChIP-seq Centrality
-log(P-value): 20858.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0237.1

ChIP-seq Centrality
-log(P-value): 20224.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: