Detailed information of matrix profile MA1179.1

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Profile summary
Name: MYB1
Matrix ID: MA1179.1
Class: Tryptophan
Family: MYB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q42575  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 48 35 48 95 0 3 0 0 0 97 73 75 44 41 32 19 27 28 60 ]
C [ 10 17 8 1 144 89 0 0 0 0 16 13 11 36 35 38 25 23 3 ]
G [ 47 11 26 32 0 52 144 0 0 8 19 18 45 20 15 65 29 17 39 ]
T [ 39 81 62 16 0 0 0 144 144 39 36 38 44 47 62 22 63 76 42 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1179.1 MA1179 1 MYB1 Arabidopsis thaliana
MYB Tryptophan
MA1179.2 MA1179 2 MYB1 Arabidopsis thaliana
MYB Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: