Detailed information of matrix profile MA1163.1

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Profile summary
Name: PHL11
Matrix ID: MA1163.1
Class: Tryptophan
Family: GARP_G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: C0SVS4  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 310 319 280 259 0 546 597 0 399 29 83 62 76 150 ]
C [ 76 32 46 82 0 44 0 0 198 0 7 352 180 104 ]
G [ 110 106 128 256 597 0 0 0 0 0 12 23 97 148 ]
T [ 101 140 143 0 0 7 0 597 0 568 495 160 244 195 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1163.1 MA1163 1 PHL11 Arabidopsis thaliana
GARP_G2-like Tryptophan
MA1163.2 MA1163 2 PHL11 Arabidopsis thaliana
GARP_G2-like Tryptophan
MA1163.3 MA1163 3 PHL11 Arabidopsis thaliana
GARP_G2-like Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0277.1

ChIP-seq Centrality
-log(P-value): 21936.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0277.1

ChIP-seq Centrality
-log(P-value): 21760.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: