Detailed information of matrix profile MA1161.1

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Profile summary
Name: TSO1
Matrix ID: MA1161.1
Class: CPP
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9LUI3  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 136 97 71 54 86 160 228 232 244 0 0 0 214 264 264 ]
C [ 15 9 11 6 38 26 0 1 0 8 0 69 0 0 0 ]
G [ 28 28 8 9 15 41 35 16 0 3 0 0 45 0 0 ]
T [ 85 130 174 195 125 37 1 15 20 253 264 195 5 0 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1161.1 MA1161 1 TSO1 Arabidopsis thaliana
CPP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: