Detailed information of matrix profile MA1156.2

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Profile summary
Name: JKD
Matrix ID: MA1156.2
Class: C2H2
Family: IDD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24039602
Uniprot ID: Q700D2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 83 6 0 0 0 0 11 31 9 57 87 134 ]
C [ 30 24 5 10 0 0 564 62 20 99 0 27 ]
G [ 31 13 4 0 596 13 0 331 42 34 0 8 ]
T [ 452 553 587 586 0 583 21 172 525 406 509 427 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1156.1 MA1156 1 JKD Arabidopsis thaliana
IDD C2H2
MA1156.2 MA1156 2 JKD Arabidopsis thaliana
IDD C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: