Detailed information of matrix profile MA1147.1

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Profile summary
Name: NR4A2::RXRA
Matrix ID: MA1147.1
Class: Nuclear
Family: NGFI-B-related::RXR-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SMiLE-seq
Validation: 7705655
Uniprot ID: P19793   P43354  
Source: 28092692
Comment:

Sequence logo

Frequency matrix

         
A [ 288 498 20 51 46 7 592 248 2 70 926 157 40 5 104 ]
C [ 212 124 11 7 134 824 38 60 69 82 54 830 937 535 473 ]
G [ 371 348 924 804 128 31 343 87 5 836 17 2 4 23 180 ]
T [ 130 29 46 139 691 138 27 604 924 12 3 11 20 437 244 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1147.1 MA1147 1 NR4A2::RXRA Homo sapiens
NGFI-B-related::RXR-related Nuclear
MA1147.2 MA1147 2 NR4A2::RXRA Homo sapiens
NGFI-B-related::RXR-related Nuclear
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: