Detailed information of matrix profile MA1123.1

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Profile summary
Name: TWIST1
Matrix ID: MA1123.1
Class: Basic
Family: Tal-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 25762439
Uniprot ID: Q15672  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 4897 5686 12796 338 17523 142 846 164 126 550 6519 5307 4354 ]
C [ 4194 5181 2516 17332 166 544 16142 145 100 1703 3693 3831 4497 ]
G [ 4726 4683 1798 241 273 1053 914 81 17703 13244 2815 3843 3892 ]
T [ 4322 2589 1029 228 177 16400 237 17749 210 2642 5112 5158 5396 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1123.1 MA1123 1 TWIST1 Homo sapiens
Tal-related Basic
MA1123.2 MA1123 2 TWIST1 Homo sapiens
Tal-related Basic
MA1123.3 MA1123 3 TWIST1 Homo sapiens
Tal-related Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0155.1

ChIP-seq Centrality
-log(P-value): 14475.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0155.1

ChIP-seq Centrality
-log(P-value): 13896.3

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: