Detailed information of matrix profile MA1123.1

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Profile summary
Name: TWIST1
Matrix ID: MA1123.1
Class: Basic
Family: Tal-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 25762439
Uniprot ID: Q15672  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 5396 5158 5112 2642 210 17749 237 16400 177 228 1029 2589 4322 ]
C [ 3892 3843 2815 13244 17703 81 914 1053 273 241 1798 4683 4726 ]
G [ 4497 3831 3693 1703 100 145 16142 544 166 17332 2516 5181 4194 ]
T [ 4354 5307 6519 550 126 164 846 142 17523 338 12796 5686 4897 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1123.1 MA1123 1 TWIST1 Homo sapiens
Tal-related Basic
MA1123.2 MA1123 2 TWIST1 Homo sapiens
Tal-related Basic
MA1123.3 MA1123 3 TWIST1 Homo sapiens
Tal-related Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0155.1

ChIP-seq Centrality
-log(P-value): 14475.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0155.1

ChIP-seq Centrality
-log(P-value): 13896.3

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: