Detailed information of matrix profile MA1118.2

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Profile summary
Name: SIX1
Matrix ID: MA1118.2
Class: Homeo
Family: HD-SINE
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 9826681
Uniprot ID: Q15475  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 20 26 981 94 94 14 35 541 110 ]
C [ 11 1025 30 31 12 10 6 90 859 ]
G [ 7 9 46 871 959 8 18 77 43 ]
T [ 1070 48 51 112 43 1076 1049 400 96 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1118.1 MA1118 1 SIX1 Homo sapiens
HD-SINE Homeo
MA1118.2 MA1118 2 SIX1 Homo sapiens
HD-SINE Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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