Detailed information of matrix profile MA1115.1

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Profile summary
Name: POU5F1
Matrix ID: MA1115.1
Class: Homeo
Family: POU
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 23747866
Uniprot ID: Q01860  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 4982 3603 12693 83 717 533 11756 10560 12280 2556 3476 ]
C [ 1290 2785 122 130 192 10310 132 690 270 2104 2450 ]
G [ 1996 1908 229 67 11571 548 118 1026 257 2071 3551 ]
T [ 4846 4818 70 12834 634 1723 1108 838 307 6383 3637 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1115.1 MA1115 1 POU5F1 Homo sapiens
POU Homeo
MA1115.2 MA1115 2 POU5F1 Homo sapiens
POU Homeo
     

-log(P-value) = 75.387

TFFM details

TFFM ID: TFFM0148.1

ChIP-seq Centrality
-log(P-value): 1710.71

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0148.1

ChIP-seq Centrality
-log(P-value): 1456.82

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: