Detailed information of matrix profile MA1113.1

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Profile summary
Name: PBX2
Matrix ID: MA1113.1
Class: Homeo
Family: TALE-type
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 10082572
Uniprot ID: P40425  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 607 449 191 2379 135 57 32 2242 19 2293 262 512 ]
C [ 604 176 166 29 309 22 44 21 2419 25 399 754 ]
G [ 708 266 1897 46 507 117 2350 200 25 92 1456 793 ]
T [ 576 1604 241 41 1544 2299 69 32 32 85 378 436 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1113.1 MA1113 1 PBX2 Homo sapiens
TALE-type Homeo
MA1113.2 MA1113 2 PBX2 Homo sapiens
TALE-type Homeo
MA1113.3 MA1113 3 PBX2 Homo sapiens
TALE-type Homeo
     

-log(P-value) = 1488.41

TFFM details

TFFM ID: TFFM0146.1

ChIP-seq Centrality
-log(P-value): 11379.3

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0146.1

ChIP-seq Centrality
-log(P-value): 6893.72

TFFM detailed summary logos

Description:

Alias:

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Consensus:

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GC Content: