Detailed information of matrix profile MA1090.1

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Profile summary
Name: WRKY60
Matrix ID: MA1090.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 11449049
Uniprot ID: Q9SK33  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 270 106 136 0 0 0 1000 1000 258 145 228 ]
C [ 278 409 22 0 0 1000 0 0 608 246 228 ]
G [ 269 106 820 1000 0 0 0 0 67 465 228 ]
T [ 183 380 22 0 1000 0 0 0 67 145 316 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1090.1 MA1090 1 WRKY60 Arabidopsis thaliana
WRKY GCM
MA1090.2 MA1090 2 WRKY60 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: