Detailed information of matrix profile MA1076.2

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Profile summary
Name: WRKY15
Matrix ID: MA1076.2
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: O22176  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 412 437 326 159 79 8 7 7 1227 8 84 429 384 363 394 365 ]
C [ 296 189 338 893 8 11 4 2 3 1210 515 163 175 201 197 271 ]
G [ 182 305 246 88 1088 3 8 1222 8 7 58 127 192 250 254 201 ]
T [ 350 309 330 100 65 1218 1221 9 2 15 583 521 489 426 395 403 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1076.1 MA1076 1 WRKY15 Arabidopsis thaliana
WRKY GCM
MA1076.2 MA1076 2 WRKY15 Arabidopsis thaliana
WRKY GCM
MA1076.3 MA1076 3 WRKY15 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0412.2

ChIP-seq Centrality
-log(P-value): 1033.28

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0412.2

ChIP-seq Centrality
-log(P-value): 1032.14

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: