Detailed information of matrix profile MA1076.2

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Profile summary
Name: WRKY15
Matrix ID: MA1076.2
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: O22176  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 403 395 426 489 521 583 15 2 9 1221 1218 65 100 330 309 350 ]
C [ 201 254 250 192 127 58 7 8 1222 8 3 1088 88 246 305 182 ]
G [ 271 197 201 175 163 515 1210 3 2 4 11 8 893 338 189 296 ]
T [ 365 394 363 384 429 84 8 1227 7 7 8 79 159 326 437 412 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1076.1 MA1076 1 WRKY15 Arabidopsis thaliana
WRKY GCM
MA1076.2 MA1076 2 WRKY15 Arabidopsis thaliana
WRKY GCM
MA1076.3 MA1076 3 WRKY15 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0412.2

ChIP-seq Centrality
-log(P-value): 1033.28

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0412.2

ChIP-seq Centrality
-log(P-value): 1032.14

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: