Detailed information of matrix profile MA1070.1

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Profile summary
Name: TGA7
Matrix ID: MA1070.1
Class: Basic
Family: Group
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 8487298
Uniprot ID: Q93ZE2  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 188 355 10 77 923 5 38 50 261 599 ]
C [ 207 161 5 4 13 860 2 162 574 63 ]
G [ 342 484 5 867 1 20 808 46 97 120 ]
T [ 263 0 980 52 63 115 152 742 68 218 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1070.1 MA1070 1 TGA7 Arabidopsis thaliana
Group Basic
MA1070.2 MA1070 2 TGA7 Arabidopsis thaliana
Group Basic
MA1070.3 MA1070 3 TGA7 Arabidopsis thaliana
Group Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0819.1

ChIP-seq Centrality
-log(P-value): 2730.11

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0819.1

ChIP-seq Centrality
-log(P-value): 2741.08

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: