Detailed information of matrix profile MA1053.1

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Profile summary
Name: ERF109
Matrix ID: MA1053.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 25882345
Uniprot ID: Q9SZ06  
Source: 24477691
Comment:

Sequence logo

Frequency matrix

         
A [ 38 50 3 3 13 4 38 207 ]
C [ 287 936 5 827 982 13 862 773 ]
G [ 661 8 989 168 2 978 13 2 ]
T [ 13 6 3 2 3 5 86 18 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1053.1 MA1053 1 ERF109 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0815.1

ChIP-seq Centrality
-log(P-value): 210.43

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0815.1

ChIP-seq Centrality
-log(P-value): 287.714

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: