Detailed information of matrix profile MA1045.1

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Profile summary
Name: NAC043
Matrix ID: MA1045.1
Class: GCM
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 24914054
Uniprot ID: Q84WP6  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 444 46 442 719 76 0 0 1000 806 310 ]
C [ 185 46 0 0 924 0 245 0 65 205 ]
G [ 185 46 83 280 0 1000 0 0 65 205 ]
T [ 185 863 475 0 0 0 755 0 65 280 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1045.1 MA1045 1 NAC043 Arabidopsis thaliana
NAC GCM
MA1045.2 MA1045 2 NAC043 Arabidopsis thaliana
NAC GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0373.1

ChIP-seq Centrality
-log(P-value): 6215.68

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0373.1

ChIP-seq Centrality
-log(P-value): 6038.34

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: