Detailed information of matrix profile MA1026.2

  1. Home
  2. Matrix > MA1026.2

Profile summary
Name: ATHB-15
Matrix ID: MA1026.2
Class: Homeo
Family: HD-ZIP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID: Q9ZU11  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 182 8 362 590 0 19 590 0 3 480 16 184 227 112 124 ]
C [ 63 87 218 0 0 462 0 0 68 0 329 131 60 84 158 ]
G [ 248 1 0 0 0 82 0 0 1 97 46 63 35 31 43 ]
T [ 97 494 10 0 590 27 0 590 518 13 199 212 268 363 265 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1026.1 MA1026 1 ATHB-15 Arabidopsis thaliana
HD-ZIP Homeo
MA1026.2 MA1026 2 ATHB-15 Arabidopsis thaliana
HD-ZIP Homeo
MA1026.3 MA1026 3 ATHB-15 Arabidopsis thaliana
HD-ZIP Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0285.1

ChIP-seq Centrality
-log(P-value): 11414.3

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0285.1

ChIP-seq Centrality
-log(P-value): 11383.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: