Detailed information of matrix profile MA1008.1

  1. Home
  2. Matrix > MA1008.1

Profile summary
Name: PHYPADRAFT_182268
Matrix ID: MA1008.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Physcomitrium patens
Data Type: PBM
Validation: 15319480
Uniprot ID: A9S898  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 171 70 924 0 0 0 1000 0 489 348 ]
C [ 291 789 0 1000 1000 0 0 1000 288 180 ]
G [ 246 70 76 0 0 1000 0 0 79 180 ]
T [ 292 70 0 0 0 0 0 0 144 292 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1008.1 MA1008 1 PHYPADRAFT_182268 Physcomitrium patens
ERF/DREB AP2/EREBP
MA1008.2 MA1008 2 PHYPADRAFT_182268 Physcomitrium patens
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: