Detailed information of matrix profile MA1008.1

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Profile summary
Name: PHYPADRAFT_182268
Matrix ID: MA1008.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Physcomitrium patens
Data Type: PBM
Validation: 15319480
Uniprot ID: A9S898  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 292 144 0 0 0 0 0 0 70 292 ]
C [ 180 79 0 0 1000 0 0 76 70 246 ]
G [ 180 288 1000 0 0 1000 1000 0 789 291 ]
T [ 348 489 0 1000 0 0 0 924 70 171 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1008.1 MA1008 1 PHYPADRAFT_182268 Physcomitrium patens
ERF/DREB AP2/EREBP
MA1008.2 MA1008 2 PHYPADRAFT_182268 Physcomitrium patens
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: