Detailed information of matrix profile MA1001.2

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Profile summary
Name: ERF11
Matrix ID: MA1001.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q9C5I3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 356 414 120 96 894 12 2 19 31 10 198 377 ]
C [ 160 136 134 40 22 1252 2 23 1218 8 203 455 ]
G [ 391 407 28 1081 331 0 1269 1230 1 1243 728 136 ]
T [ 373 323 998 63 33 16 7 8 30 19 151 312 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1001.1 MA1001 1 ERF11 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1001.2 MA1001 2 ERF11 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1001.3 MA1001 3 ERF11 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1001.4 MA1001 4 ERF076 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0330.2

ChIP-seq Centrality
-log(P-value): 400.308

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0330.2

ChIP-seq Centrality
-log(P-value): 352.497

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: