Detailed information of matrix profile MA1001.1

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Profile summary
Name: ERF11
Matrix ID: MA1001.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 9756931
Uniprot ID: Q9C5I3  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 206 213 109 25 145 131 190 258 424 276 ]
C [ 313 494 0 835 704 10 383 490 162 196 ]
G [ 316 123 887 55 51 828 154 77 181 204 ]
T [ 165 169 4 85 99 31 273 175 233 324 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1001.1 MA1001 1 ERF11 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1001.2 MA1001 2 ERF11 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1001.3 MA1001 3 ERF11 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1001.4 MA1001 4 ERF076 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0330.1

ChIP-seq Centrality
-log(P-value): 6851.39

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0330.1

ChIP-seq Centrality
-log(P-value): 6578.11

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: