Detailed information of matrix profile MA1001.2

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Profile summary
Name: ERF11
Matrix ID: MA1001.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q9C5I3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 312 151 19 30 8 7 16 33 63 998 323 373 ]
C [ 136 728 1243 1 1230 1269 0 331 1081 28 407 391 ]
G [ 455 203 8 1218 23 2 1252 22 40 134 136 160 ]
T [ 377 198 10 31 19 2 12 894 96 120 414 356 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1001.1 MA1001 1 ERF11 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1001.2 MA1001 2 ERF11 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1001.3 MA1001 3 ERF11 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1001.4 MA1001 4 ERF076 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0330.2

ChIP-seq Centrality
-log(P-value): 400.308

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0330.2

ChIP-seq Centrality
-log(P-value): 352.497

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: