Detailed information of matrix profile MA0995.2

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Profile summary
Name: ERF039
Matrix ID: MA0995.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q9SUK8  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 282 285 679 3 11 19 1381 1 1521 495 484 ]
C [ 574 875 23 1617 1605 13 137 1615 21 533 420 ]
G [ 258 168 864 23 10 1605 45 15 72 236 278 ]
T [ 530 316 78 1 18 7 81 13 30 380 462 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0995.1 MA0995 1 ERF039 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA0995.2 MA0995 2 ERF039 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA0995.3 MA0995 3 ERF039 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0477.2

ChIP-seq Centrality
-log(P-value): 833.412

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0477.2

ChIP-seq Centrality
-log(P-value): 897.187

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: