Detailed information of matrix profile MA0995.1

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Profile summary
Name: ERF039
Matrix ID: MA0995.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q9SUK8  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 198 190 524 7 12 5 660 34 473 240 ]
C [ 316 395 39 965 980 2 140 912 120 274 ]
G [ 225 170 416 8 2 989 86 11 242 236 ]
T [ 261 244 20 19 6 4 115 43 165 250 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0995.1 MA0995 1 ERF039 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA0995.2 MA0995 2 ERF039 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA0995.3 MA0995 3 ERF039 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0477.1

ChIP-seq Centrality
-log(P-value): 801.106

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0477.1

ChIP-seq Centrality
-log(P-value): 865.07

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: