Detailed information of matrix profile MA0965.2

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Profile summary
Name: BIM2
Matrix ID: MA0965.2
Class: Basic
Family: bHLH
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 15680330
Uniprot ID: Q9CAA4  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 3104 3238 3383 2362 2197 28 10091 16 162 84 36 3003 1996 3238 2808 2882 ]
C [ 2178 2012 1958 1874 1902 10294 36 10174 23 165 20 3275 4150 1796 2323 2214 ]
G [ 2211 2323 1799 4148 3272 20 166 23 10179 36 10294 1899 1874 1964 2010 2174 ]
T [ 2885 2805 3238 1994 3007 36 85 165 14 10093 28 2201 2358 3380 3237 3108 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0965.1 MA0965 1 BIM2 Arabidopsis thaliana
bHLH Basic
MA0965.2 MA0965 2 BIM2 Arabidopsis thaliana
bHLH Basic
MA0965.3 MA0965 3 BIM2 Arabidopsis thaliana
bHLH Basic
     

-log(P-value) = 7212.57

TFFM details

TFFM ID: TFFM0812.1

ChIP-seq Centrality
-log(P-value): 7835.64

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0812.1

ChIP-seq Centrality
-log(P-value): 7923.56

TFFM detailed summary logos

Description:

Alias:

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GC Content: